BedgraphFiles.jl

BedgraphFiles v2.4.0

Diff since v2.3.1

BedgraphFiles v2.3.1

Diff since v2.1.3

Merged pull requests:

• CompatHelper: add new compat entry for "Requires" at version "0.5" (#7) (@github-actions[bot])
• CompatHelper: add new compat entry for "DataValues" at version "0.4" (#8) (@github-actions[bot])

• Compatibility updates (#5 and #6 from davidanthoff).
• CI update.

v2.1.2 (2019-07-04)

Diff since v2.1.1

Merged pull requests:

• add Logging to test deps (#4) (KristofferC)

There are no new features in this release. However, this release contains some minor internal improvements as well as a much-appreciated Project.toml update from @davidanthoff.

This release:

• further develops integration with IterableTables.jl.
• facilitates more direct loading into Vector{Bedgraph.Record}.
• facilitates the use of save methods in continuation/pipes as they now return data.

This hotfix reverts the load and save methods back to private to allow FileIO.jl to dispatch to these private methods using module-scoping.

See https://github.com/juliaio/fileio.jl#implementing-loaderssavers for more information.

Tidy and reinstate requirements for METADATA.jl.

• Drop Julia v0.6 support.
• Support Julia v0.7 and v1.0.

• BedgraphFiles now uses the Bedgraph package to read and write files.
• Saving now writes a basic header. However, saving on top of an existing file will overwrite any existing header!
• Added precompile.

• Including David Anthoff's TableTraits.jl.
• Improved consistency of column names with documented Bedgraph format (breaking change).
• Relaxed DataFrames requirement.

Correction to allow tests to run.

• Relaxes DataFrames requirement.
• Formatting and notes to more clearly state intended development.
• Temporary work around to register with FileIO.

Initial implementation.

Note: this package does not currently handle bedGraph track definition lines.