DeconvOptim.jl

A multi-dimensional, high performance deconvolution framework written in Julia Lang for CPUs and GPUs.

MIT License

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DeconvOptim.jl - v0.7.3 Latest Release

Published by github-actions[bot] 11 months ago

DeconvOptim v0.7.3

Diff since v0.7.2

Merged pull requests:

  • CompatHelper: add new compat entry for Statistics at version 1, (keep existing compat) (#48) (@github-actions[bot])
  • CompatHelper: bump compat for Interpolations to 0.15, (keep existing compat) (#49) (@github-actions[bot])
DeconvOptim.jl - v0.7.2

Published by github-actions[bot] over 1 year ago

DeconvOptim v0.7.2

Diff since v0.7.1

Closed issues:

  • Misleading generate_psf function (#44)

Merged pull requests:

  • Migrate from SnoopPrecompile to PrecompileTools (#41) (@timholy)
  • CompatHelper: bump compat for StatsBase to 0.34, (keep existing compat) (#42) (@github-actions[bot])
  • fix(docs): typos in docs and links (#43) (@kunzaatko)
  • fix: add notes to documentation about shift (#45) (@kunzaatko)
  • rm: take_real_or_not no longer necessary (#47) (@kunzaatko)
DeconvOptim.jl - zenodo

Published by roflmaostc over 1 year ago

DeconvOptim.jl - v0.7.1

Published by github-actions[bot] over 1 year ago

DeconvOptim v0.7.1

Diff since v0.7.0

Merged pull requests:

  • CompatHelper: bump compat for FillArrays to 1, (keep existing compat) (#40) (@github-actions[bot])
DeconvOptim.jl - v0.7.0

Published by github-actions[bot] over 1 year ago

DeconvOptim v0.7.0

Diff since v0.6.0

Closed issues:

  • Implement proper Callback for NCC value (#29)
  • Update examples (#36)

Merged pull requests:

  • CompatHelper: bump compat for FillArrays to 0.13, (keep existing compat) (#35) (@github-actions[bot])
DeconvOptim.jl - v0.6.0

Published by github-actions[bot] over 2 years ago

DeconvOptim v0.6.0

Diff since v0.5.0

Merged pull requests:

  • added the option to keep the large size by using a negative padding. (#31) (@RainerHeintzmann)
  • Support for quantitative evaluation of deconvolutions and addition of the inital argument to supply start values. (#33) (@RainerHeintzmann)
DeconvOptim.jl - v0.5.0

Published by github-actions[bot] about 3 years ago

DeconvOptim v0.5.0

Diff since v0.4.1

Closed issues:

  • conv returns a copy instead of the same similar array (#25)
  • @avxt LoopVectorization for loss functions (#26)
  • FFTW flags measure instead of estimate (#27)
DeconvOptim.jl - v0.4.1

Published by github-actions[bot] about 3 years ago

DeconvOptim v0.4.1

Diff since v0.4.0

Closed issues:

  • Mapping gradient wrong (#22)
DeconvOptim.jl - v0.4.0

Published by github-actions[bot] over 3 years ago

DeconvOptim v0.4.0

Diff since v0.3.0

Merged pull requests:

  • added some more positivity contraint functions (#21) (@RainerHeintzmann)
  • bug fix for the derivative of Piecewise_positive() (#23) (@RainerHeintzmann)
DeconvOptim.jl - v0.3.0

Published by github-actions[bot] over 3 years ago

DeconvOptim v0.3.0

Diff since v0.2.0

Closed issues:

  • Good's roughness (#16)
  • conv_psf doubling due to FourierTools package (#17)
DeconvOptim.jl - v0.2.0

Published by github-actions[bot] over 3 years ago

DeconvOptim v0.2.0

Diff since v0.1.5

  • Change conv methods to new convention

Closed issues:

  • Allow to edit fft_dims (#14)
DeconvOptim.jl - v0.1.5

Published by github-actions[bot] over 3 years ago

DeconvOptim v0.1.5

Diff since v0.1.4

  • CUDA 3.0 works
  • Some regularizer fixes
  • Documentation update

Closed issues:

  • Try Different LineSearch Algorithms (#11)

Merged pull requests:

  • CompatHelper: bump compat for "Noise" to "0.3" (#13) (@github-actions[bot])
DeconvOptim.jl - v0.1.4

Published by github-actions[bot] over 3 years ago

DeconvOptim v0.1.4

Diff since v0.1.3

Closed issues:

  • GR together with padding produces bad results (#2)
  • FFTW use measure instead of estimate (#10)
DeconvOptim.jl - v0.1.3

Published by github-actions[bot] over 3 years ago

DeconvOptim v0.1.3

Diff since v0.1.2

Adapt code that it is able to handle CUDA arrays. Furthermore minor fixes in Poisson loss due to numerical issues.

Merged pull requests:

  • CompatHelper: bump compat for "Optim" to "1.2" (#5) (@github-actions[bot])
  • CompatHelper: bump compat for "Zygote" to "0.6" (#6) (@github-actions[bot])
  • CompatHelper: bump compat for "Interpolations" to "0.13" (#7) (@github-actions[bot])
DeconvOptim.jl - v0.1.2

Published by github-actions[bot] almost 4 years ago

DeconvOptim v0.1.2

Closed issues:

  • Quick Example Artifacts (#3)
  • TagBot trigger issue (#4)

Merged pull requests:

  • New pipeline (#1) (@roflmaostc)
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