A Julia package for simulation, inference and learning of Hidden Markov Models.
MIT License
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Published by github-actions[bot] 24 days ago
Breaking changes
In-place single-sequence routines were hidden from the public API. Most user code will not be affected.
Performance improvements
seq_ends
is passed as an NTuple
. This helps remove overhead for very few sequences (especially for a single one).Merged pull requests:
Closed issues:
@threads
for a single sequence (#110)Published by github-actions[bot] 27 days ago
Merged pull requests:
seq_ends
is passed as a tuple (#113) (@gdalle)Closed issues:
Merged pull requests:
Closed issues:
Vector{Distribution{Univariate, Continuous}}
in Baum Welch (#101)Published by github-actions[bot] 5 months ago
Merged pull requests:
Closed issues:
Published by github-actions[bot] 7 months ago
Merged pull requests:
Closed issues:
Published by github-actions[bot] 8 months ago
See #93 for the user-facing changes
Merged pull requests:
Published by github-actions[bot] 8 months ago
Published by github-actions[bot] 8 months ago
Breaking changes
See the API reference for more details
Multiple sequences:
Removals:
HMMs
for the package name(Abstract)MarkovChain
PermutedHMM
Renamings:
initial_distribution(hmm)
became initialization(hmm)
obs_distribution(hmm, i)
became obs_distributions(hmm)
baum_welch
, check_loglikelihood_increasing
became loglikelihood_increasing
Storage:
ForwardBackwardStorage
, ξ
is now a vector of abstract matrices instead of a 3-dimensional arrayMethod signatures:
algorithm(hmm, obs_seqs, nb_seqs)
became algorithm(hmm, obs_seq, [control_seq]; seq_ends)
.fit!(hmm, init_count, trans_count, obs_seq, state_marginals)
became fit!(hmm, fb_storage, obs_seq, control_seq; seq_ends)
Return types;
Merged pull requests:
Closed issues:
fit!
(#53)Published by gdalle 12 months ago
Full Changelog: https://github.com/gdalle/HiddenMarkovModels.jl/compare/v0.3.0...v0.3.1
Published by gdalle about 1 year ago
Full Changelog: https://github.com/gdalle/HiddenMarkovModels.jl/compare/v0.2.2...v0.3.0
Published by gdalle over 1 year ago
Full Changelog: https://github.com/gdalle/HiddenMarkovModels.jl/compare/v0.2.1...v0.2.2
Published by gdalle over 1 year ago
Full Changelog: https://github.com/gdalle/HiddenMarkovModels.jl/compare/v0.2.0...v0.2.1
Published by gdalle over 1 year ago
Full Changelog: https://github.com/gdalle/HiddenMarkovModels.jl/compare/v0.1.0...v0.2.0
Published by gdalle over 1 year ago
Full Changelog: https://github.com/gdalle/HiddenMarkovModels.jl/commits/v0.1.0