MIToS.jl

Solve minor bug with empty file reading

Solve gaussdca bug with Julia 1.0 and Windows

Solve gaussdca bug with Julia 1.0

MIToS v2.3 requires Julia v0.7 or v1.0. This release drops Julia 0.6 support.

• Formatting.jl is used in place of Format.jl.

• SIFTS.get returns the desired object or missing instead of Nullables.

• PIR FileFormat is included to read and write alignments in PIR/NBRF format.

• Utils.Format was renamed to Utils.FileFormat

• HTTP.jl is used in place of FTPClient.jl and the deprecated Requests.jl in
  Utils.download_file to download files.

• Format.jl is used in place of Formatting.jl

• Solve bug in the printing of matrices of Residues using FileFormats.

• FTPClient.jl is used in Utils.download_file to download files from FTP.

• CodecZlib.jl is used in place of GZip.jl speeding up the parsing of compressed files.

• Improvements in MSA and PDB parsing speed.

• Improvement in MSA.percentidentity speed.

• Information.gaussdca now uses Julia's serialize and deserialize instead of JLD.

The Conservation.jl script was added.

MIToS 2.1.0 is the first MIToS version with Julia 0.6 support (It drops Julia 0.5 support).

MIToS 2.0 is the first MIToS version with Julia 0.5 support (It drops Julia 0.4 support). MIToS was slightly redesigned to take advantage of the new Julia capabilities. As a consequence, this version introduces several breaking changes and new features.