NCDatasets.jl

NCDatasets v0.12.4

Diff since v0.12.3

Slice of a multifile variable is now a subtype of AbstractArray{Union{Missing,T},N} where {T,N} for compatibility with nomissing.

Closed issues:

• Call for volunteers to test the updated NetCDF v4.8.1 (in particular for Windows and Apple users) (#165)

NCDatasets v0.12.3

Diff since v0.12.2

Closed issues:

• Memory use loading files (#89)
• Incorrectly handeling attributes scale_factor and add_offset (#95)
• NCDatasets fails to install on Mac OS with brew julia install (#153)
• Open in Python but in Julia cannot (#168)

Merged pull requests:

• Minor corrections to README.md (#171) (@petershintech)
• add capability to read only part of continuous ragged array (#172) (@gaelforget)

NCDatasets v0.12.2

Diff since v0.12.1

Closed issues:

• Automatic date detection missing in floating numbers as time (#169)

NCDatasets v0.12.1

Diff since v0.12.0

NCDatasets v0.12.0

Diff since v0.11.9

Breaking change: when loading a NetCDF variable all values equal to the missing_value attribute are replaced by missing following the CF conventions. Previously, only the values equal to _FillValue were replaced by missing.

Closed issues:

• Allow symbols in attrib dicts? (#154)
• windows, ERROR: could not load symbol "nc_open" (#158)
• Get variable by standard_name (#160)
• load! CFVariable without allocations (#161)

Merged pull requests:

• feat: allow Symbol names for attributes (#156) (@adigitoleo)
• Symbol attributes (#157) (@adigitoleo)
• feat: Add show method for dimensions (#159) (@adigitoleo)

NCDatasets v0.11.9

Diff since v0.11.8

NCDatasets v0.11.8

Diff since v0.11.7

Closed issues:

• Handle CRS (#85)
• mbedtls issue in Fedora linux (#126)
• Warning: Inactive precompile statement (#142)
• Does NCDatasets.jl work with @threads well? (#144)
• NetCDF: Not a valid data type or _FillValue type mismatch (NetCDF error code: -45) (#145)
• can't find the function ncsave (#146)
• Conflicting with GMT.jl package (#147)
• fillvalue() is not defined for MFVariable (#148)
• Loading time from netcdf file as unixtime directly and NaN for fillvalue? (#151)
• ERROR: LoadError: UndefVarError: libnetcdf not defined (#152)

Merged pull requests:

• Fix broken cross reference links in documentation (#149) (@adigitoleo)

NCDatasets v0.11.7

Diff since v0.11.6

Closed issues:

• Wrong output example for ds.attrib in index.md (#134)
• cannot open multi file dataset with deferopen = true (#138)
• Prodlem reading byte variable (#139)
• Attributes as NC_STRING vs array of NC_CHAR (#140)

Merged pull requests:

• Reduce compilation time (#136) (@rafaqz)
• support symbol indexing for MFDataset as well (#137) (@visr)
• Fix a typo and use CF standard names (#141) (@petershintech)

NCDatasets v0.11.6

Diff since v0.11.5

NCDatasets v0.11.5

Diff since v0.11.4

NCDatasets v0.11.4

Diff since v0.11.3

Closed issues:

• Bound error in multifile load attempt (#108)
• Bounds variable conversion (#117)
• NCDatasets fails to load on Julia 1.6-beta1 (#118)
• Automatically save Dates (#125)
• Allow * syntax for multi file loading (#127)
• how to save coordinates (#129)
• controlling chunk cache (#130)

Merged pull requests:

• mention Glob.jl (#128) (@Datseris)
• docs: fix dim field name (#131) (@visr)

NCDatasets v0.11.3

Diff since v0.11.2

Closed issues:

• Missing method for NCDatasets.load!(ds["var"],buf,:,1) (#120)

Merged pull requests:

• Adding method to load in-place mixing ranges and ints as indices. (#121) (@aramirezreyes)

NCDatasets v0.11.2

Diff since v0.11.1

Merged pull requests:

• Change attribute color from blue to cyan (#119) (@briochemc)

NCDatasets v0.11.1

Diff since v0.11.0

NCDatasets v0.11.0

Diff since v0.10.4

Closed issues:

• Convenience selection function for sub-parts of NCDataset (#47)
• NetCDF error: NetCDF: Operation not allowed in define mode (NetCDF error code: -39) (#96)
• Not possible to use _FillValue for variables of type String (#99)
• error loading file in edit mode ("a") (#100)
• ds[var] in multi-file datasets directly returns the data array (#102)
• attempt to transform dimensional information to Ranges instead of Vectors? (#103)
• closing an NCDataset based on path (#106)
• FillValue not working automatically (#107)
• "add_offset" and "scale_factor" is not applied correctly in multi-file .nc datasets (#109)

Merged pull requests:

• use the new NetCDF_jll; require julia 1.3 (#88) (@visr)
• Update performance.md (#111) (@aramirezreyes)
• Update performance.md (#112) (@aramirezreyes)
• use Ref instead of size 1 Vector (#113) (@visr)

NCDatasets v0.10.4

Diff since v0.10.3

Closed issues:

• Problem on opening multiple files (#94)
• Non-automatic convertion of missing values to missing (#97)

Merged pull requests:

• CompatHelper: bump compat for "DataStructures" to "0.18" (#98) (@github-actions[bot])

NCDatasets v0.10.3

Diff since v0.10.2

Closed issues:

• Printing problems in Juno (#65)
• Using ncgen on a file with white spaces in variable names 💣 (#84)
• Not loading files when Plots.jl is used (#86)
• Dimension ordering (#87)
• how to define the dimension value? (#90)
• Freeze in _nc_check_size_put_vars (#92)

Merged pull requests:

• do not throw when closing closed NCDataset (#93) (@visr)

NCDatasets v0.10.2

Diff since v0.10.1

Closed issues:

• Is there a way to close all Datasets at one go (#82)

Merged pull requests:

• anti-alias doc (#81) (@visr)
• require BinDeps 1.0.1 (#83) (@visr)

NCDatasets v0.10.1

Diff since v0.10.0

Closed issues:

• High Memory Usage (#75)
• Unable to build NCDatasets.jl (#80)

NCDatasets v0.10.0

Diff since v0.9.5

Closed issues:

• Asmmetry with Missings and DateTime when loading and saving vars. (#38)
• Read a variable of Char Datatype (#39)
• Data typed Union{Missing, Dates.DateTime, AbstractCFDateTime, Number} when calling discrete indices (#40)
• conflict of netcdf.dll (#41)
• Cannot read time variable: "Unsupported calendar: Gregorian" (#42)
• cannot install after update because incompatibility with other packages? (#45)
• Something is wrong with mean: takes too much time (#48)
• Accessing a dataset with a range takes forever...? (#49)
• [DOC] How to get the dimensions of a dataset? (#50)
• Why is CFVariable a subtype of AbstractArray? (#51)
• Make size of a NCDataset/CFVariable return a NamedTuple instead (#52)
• Quick question on scale_factor and add_offset (#56)
• Can one obtain the dimensions directly from a dataset? (#63)
• Question: Is it possible to obtain the dimension values from a CFVariable? (#69)
• Ability to not apply add_offset and scale_factor (#70)
• Direct convertion to DimensionalArray (#72)
• Usage of "attrib" keywords in defVar (#73)
• Feature request: attributes(x) returns a dictionary. (#76)
• [DOC] How to merge 2 NCDatasets (same dims/attributes) (#77)

Merged pull requests:

• Improve README, add TOC, add alias NCDataset (#44) (@Datseris)
• update BinDep upper version bound (#46) (@Alexander-Barth)
• nsize function for CFVariable (#53) (@Datseris)
• Big documentation re-structure and improvement!!! (#55) (@Datseris)
• Seperate source code into files with sections (#59) (@Datseris)
• Add comment in Manual pointing explicitly to the docs (#62) (@Datseris)
• Improve docs: mention the mean problem (#64) (@Datseris)
• Improve nomissing functionality (#66) (@Datseris)
• CompatHelper: bump compat for "CondaBinDeps" to "0.2" (#68) (@github-actions[bot])
• Install TagBot as a GitHub Action (#74) (@JuliaTagBot)
• add merge function (#78) (@Datseris)