ParameterEstimation.jl

ParameterEstimation.jl is a Julia package for estimating parameters and initial conditions of ODE models given measurement data.

GPL-3.0 License

Stars
27

Bot releases are visible (Hide)

ParameterEstimation.jl - v0.4.0 Latest Release

Published by github-actions[bot] 4 months ago

ParameterEstimation v0.4.0

Diff since v0.3.0

Merged pull requests:

  • Spring cleaning: update versions, remove Oscar and msolve (#97) (@sumiya11)
  • Update Project.toml (#99) (@alexeyovchinnikov)
  • Add Nemo compat (#100) (@sumiya11)
ParameterEstimation.jl - v0.4.0

Published by alexeyovchinnikov 4 months ago

Removed dependency on Oscar and on msolve backend

ParameterEstimation.jl - v0.3.0

Published by github-actions[bot] 9 months ago

ParameterEstimation v0.3.0

Diff since v0.2.1

Merged pull requests:

  • Force a static compute graph in the threading (#56) (@ChrisRackauckas)
  • Some benchmark improvements (#57) (@ChrisRackauckas)
  • Update LICENSE (#59) (@alexeyovchinnikov)
  • CompatHelper: bump compat for TaylorSeries to 0.14, (keep existing compat) (#60) (@github-actions[bot])
  • CompatHelper: bump compat for Oscar to 0.12, (keep existing compat) (#62) (@github-actions[bot])
  • Fix compat with StructuralIdentifiability (#63) (@ChrisRackauckas)
  • Fix typo in AMIGO2 crauste equations (#65) (@ChrisRackauckas)
  • Fix typo in Inf handling (#66) (@ChrisRackauckas)
  • More perf (#68) (@ChrisRackauckas)
  • CompatHelper: bump compat for TaylorSeries to 0.15, (keep existing compat) (#70) (@github-actions[bot])
  • Models (#71) (@iliailmer)
  • Fix bounds on StructuralIdentifiability (#73) (@ChrisRackauckas)
  • CompatHelper: bump compat for Groebner to 0.4, (keep existing compat) (#74) (@github-actions[bot])
  • CompatHelper: bump compat for Oscar to 0.13, (keep existing compat) (#75) (@github-actions[bot])
  • add global bounded versions (#76) (@ChrisRackauckas)
  • CompatHelper: bump compat for Groebner to 0.5, (keep existing compat) (#77) (@github-actions[bot])
  • CompatHelper: bump compat for StructuralIdentifiability to 0.5, (keep existing compat) (#78) (@github-actions[bot])
  • New interpolation schemes, modified filtering, and added tests (#79) (@orebas)
  • CompatHelper: add new compat entry for PrecompileTools at version 1, (keep existing compat) (#80) (@github-actions[bot])
  • CompatHelper: add new compat entry for Suppressor at version 0.2, (keep existing compat) (#81) (@github-actions[bot])
  • CompatHelper: add new compat entry for ForwardDiff at version 0.10, (keep existing compat) (#82) (@github-actions[bot])
  • CompatHelper: add new compat entry for TaylorDiff at version 0.2, (keep existing compat) (#84) (@github-actions[bot])
  • CompatHelper: add new compat entry for BaryRational at version 1, (keep existing compat) (#85) (@github-actions[bot])
  • CompatHelper: add new compat entry for ArbNumerics at version 1, (keep existing compat) (#86) (@github-actions[bot])
  • Adding "julia = 1.9" to Compat section (#87) (@orebas)
  • [skip ci] Update Project.toml (#89) (@iliailmer)
  • [skip ci] Update Project.toml (#90) (@iliailmer)
ParameterEstimation.jl - v0.2.1

Published by github-actions[bot] over 1 year ago

ParameterEstimation v0.2.1

Diff since v0.2.0

Merged pull requests:

  • Tests update: new versions of dependencies. (#55) (@iliailmer)
ParameterEstimation.jl - v0.2.0

Published by github-actions[bot] over 1 year ago

ParameterEstimation v0.2.0

Diff since v0.1.0

Closed issues:

  • Initial Release (#44)

Merged pull requests:

  • full poly system (#51) (@iliailmer)
  • Input handling (#52) (@iliailmer)
  • CompatHelper: add new compat entry for BenchmarkTools at version 1, (keep existing compat) (#53) (@github-actions[bot])
  • CompatHelper: add new compat entry for StructuralIdentifiability at version 0.4, (keep existing compat) (#54) (@github-actions[bot])
ParameterEstimation.jl - v0.1.0

Published by github-actions[bot] over 1 year ago

ParameterEstimation v0.1.0

Merged pull requests:

  • Add Identifiability Check (#1) (@iliailmer)
  • Construct polynomial equations (#2) (@iliailmer)
  • CompatHelper: add new compat entry for Groebner at version 0.2, (keep existing compat) (#3) (@github-actions[bot])
  • CompatHelper: add new compat entry for TestSetExtensions at version 2, (keep existing compat) (#4) (@github-actions[bot])
  • CompatHelper: add new compat entry for Nemo at version 0.32, (keep existing compat) (#5) (@github-actions[bot])
  • CompatHelper: add new compat entry for Symbolics at version 4, (keep existing compat) (#6) (@github-actions[bot])
  • CompatHelper: add new compat entry for TaylorSeries at version 0.12, (keep existing compat) (#7) (@github-actions[bot])
  • Sciml style (#9) (@iliailmer)
  • Add transcendence basis substitutions (#10) (@iliailmer)
  • CompatHelper: bump compat for Nemo to 0.32, (keep existing compat) (#14) (@github-actions[bot])
  • Use identifiability in filtering (#15) (@iliailmer)
  • Multi point eval (#16) (@iliailmer)
  • Docs (#19) (@iliailmer)
  • Add becnhmark scripts (#20) (@iliailmer)
  • Remove warning (#21) (@iliailmer)
  • Threaded (#22) (@iliailmer)
  • Tr basis add (#23) (@iliailmer)
  • Fix for non-id filtering (#27) (@iliailmer)
  • More benchmarks: IQM (#29) (@iliailmer)
  • Rename func (#30) (@iliailmer)
  • Remove unneeded dependencies (#32) (@iliailmer)
  • Basic estimation tests (#33) (@iliailmer)
  • Uneven times (#34) (@iliailmer)
  • Output display (#35) (@iliailmer)
  • Add Oscar for msolve support (#36) (@iliailmer)
  • Convert benchmarks (#37) (@iliailmer)
  • Num points err (#38) (@iliailmer)
  • Compats (#45) (@iliailmer)
Package Rankings
Top 26.5% on Juliahub.com
Badges
Extracted from project README
Tests Documentation
Related Projects