PyHDX

Derive ΔG for single residues from HDX-MS data

MIT License

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PyHDX - First Beta Release

Published by Jhsmit over 4 years ago

This is the first beta release of pyHDX

Main features:

  • Weighted averaging of exchange rate
  • Global fitting of exchange rate
  • Global fitting of protection factors taking intrinsic rates into account

Changelog

  • Version numbers by pbr
  • Version numbers in exported data and web app title
  • Global fit now combines sections with a gap of zero
  • Added global PF fitting test
  • Regularization is now calculated as the mean instead of the sum as the error function is MSE not total squared difference
  • Updated Neural networks to Keras functional API to allow parallel fitting of multiple datasets
PyHDX - Version 0.0.1 alpha1

Published by Jhsmit over 4 years ago

Early alpha before removal of expfact and deprecated code