BrainStat

Commits

• fc23ddd: [TES] workflow on 18.0 (#319) (saratheriver) #319
• 3db1449: [v0.4.2] trying to pypi it (#320) (saratheriver) #320
• 6e9f415: [v0.4.3] just work already (Sara Lariviere) #321
• 557a52e: [v0.4.3] just work already (#321) (saratheriver) #321
• 810e8de: [FIX] removed mltbx for now (saratheriver) #322
• cfdd61c: Merge branch 'master' into sl (saratheriver) #322
• 4f3fb1e: [FIX] removed mltbx for now, v0.4.2 (saratheriver) #322

What's Changed

• v0.4.1 by @saratheriver in https://github.com/MICA-MNI/BrainStat/pull/318

Full Changelog: https://github.com/MICA-MNI/BrainStat/compare/v0.4.0...v0.4.1

Full Changelog: https://github.com/MICA-MNI/BrainStat/compare/v0.4.0...v0.4.0

Commits

• d80e465: Create CODE_OF_CONDUCT.md (Reinder Vos de Wael)
• f1ea4dc: [ENH] Add warning for categorical variables (#279) (Reinder Vos de Wael) #279
• c635f1f: Update init.py (Reinder Vos de Wael)

Commits

• eb4de6a: [REF] Black v22 update (#277) (Reinder Vos de Wael) #277
• 28245e3: [FIX] Resolves nilearn mni152 mask change (#276) (Reinder Vos de Wael) #276
• 476ccd2: [FIX] Fixes for volumetric data (#278) (Reinder Vos de Wael) #278
• ccec763: Update init.py (Reinder Vos de Wael)

Commits

• 512791f: [FIX] Fix mypy errors (#273) (Reinder Vos de Wael) #273
• 701f0bf: [GIT] Add CITATION.cff (#272) (Reinder Vos de Wael) #272
• 87b0109: add a warning for 0.3.4 (Reinder Vos de Wael)
• 21e8b4b: [DOC] MATLAB tutorial update. (Reinder Vos de Wael) #271
• 63cdf4e: version bump (Reinder Vos de Wael)

Commits

• dff5577: Version 0.3.3 (#262) (Reinder Vos de Wael) #262

Commits

• 9f08a86: [FIX, DOC] Update tutorial 2, fix spaces in feature_names (Reinder Vos de Wael) #254
• ac3c356: [ENH] Remove pyembree requirement, add CIVET support to histology (#256) (Reinder Vos de Wael) #256

Commits

• 5d7d35f: [FIX] Fix categorical contrasts (#251) (Reinder Vos de Wael) #251

Commits

• f685085: [ENH] Version 0.3.0 (#249) (Reinder Vos de Wael) #249

Commits

• ee3acc3: version 0.2.8 (#240) (Reinder Vos de Wael) #240
• 0ecaabb: [FIX] Fix version number (#246) (Reinder Vos de Wael) #246

Commits

• 2675ee6: [FIX] Include data_json and logging.conf with distribution (Reinder Vos de Wael) #227
• 4a6b340: Merge branch 'master' into development (Reinder Vos de Wael) #228
• 72cfaf2: version bump (Reinder Vos de Wael) #228
• 0c7a8e6: Change to MANIFEST (Reinder Vos de Wael) #228
• 07aa29d: [FIX] Fix ReadTheDocs requirements. (Reinder Vos de Wael) #231
• 2053262: Merge branch 'master' into development (Reinder Vos de Wael) #231
• d7fd5d0: [FIX] Fix erroneous Git deletion (#237) (Reinder Vos de Wael) #237
• 9e03e09: [FIX] Fix ReadTheDocs requirements (Reinder Vos de Wael) #231
• f05a399: [FIX] Fix ReadTheDocs out of memory (Reinder Vos de Wael) #231
• 2f5936a: version bump (Reinder Vos de Wael) #231

Commits

• be5b896: [FIX] Fix inclusion of data_urls.json and logging.conf (#228) (Reinder Vos de Wael) #228

Commits

• 0209cdd: [DOC] Tutorial 2 (#222) (Reinder Vos de Wael) #222
• 8196da3: Merge branch 'master' into development (Reinder Vos de Wael) #223
• b84fdbb: [DOC] Tutorial 2 (#222) (#223) (Reinder Vos de Wael) #223
• 164bb3a: [DOC] MATLAB tutorial 2 (#224) (Reinder Vos de Wael) #224
• 99aeed2: Merge branch 'master' into development (Reinder Vos de Wael) #225
• 2b9a32a: version bump; fix matlab tests (Reinder Vos de Wael) #225
• 018bca1: [DOC] Embed MATLAB tutorials (Reinder Vos de Wael) #225
• c26f3b6: [FIX] Undo accidental stage. (Reinder Vos de Wael) #225

Commits

• 5dc296a: [ENH] Add Genetics module for MATLAB (#212) (Reinder Vos de Wael) #212
• f5e5087: Create codeql-analysis.yml (#215) (Reinder Vos de Wael) #215
• 773daa6: undo codeql push (Reinder Vos de Wael) #213
• f5cd1d0: [ENH] Adds the Glasser parcellation (#216) (Reinder Vos de Wael) #216
• 89a4b9e: [ENH] MATLAB surface decoder (#217) (Reinder Vos de Wael) #217
• c3da508: [FIX] fix mpc partial corr (#218) (Reinder Vos de Wael) #218
• 470aa91: [GIT] Remove MATLAB CI on Push (Reinder Vos de Wael) #213
• cbeecbb: [ENH] Add MICs data loader (#219) (Reinder Vos de Wael) #219
• ffe4bc1: styling (Reinder Vos de Wael) #213
• bff9120: [ENH] Added fslr-32k to MATLAB context decoder (Reinder Vos de Wael) #213
• 7d43e07: [FIX] Fix mypy complaints (Reinder Vos de Wael) #213
• 5d938df: [DOC] Tutorial 1 Update (#220) (Reinder Vos de Wael) #220
• 08b1169: Merge branch 'master' into development (Reinder Vos de Wael) #213
• 0e03e20: MATLAB tutorial 1 (#221) (Reinder Vos de Wael) #221
• 72c3bfd: [TST] Remove mesh_normalize test (Reinder Vos de Wael) #213
• 647c62f: Merge branch 'development' of github.com:MICA-MNI/BrainStat into development (Reinder Vos de Wael) #213
• dd81089: Version bump (Reinder Vos de Wael) #213
• 6c3cc7e: Fix surface processing (Reinder Vos de Wael) #213
• bcc2732: [TST] Remove tutorial test download (too big) (Reinder Vos de Wael) #213

Commits

• 9119ad9: [REF] General code cleanup (#201) (Reinder Vos de Wael) #201
• aefd402: [REF] Update license, setup (#202) (Reinder Vos de Wael) #202
• e456ed0: [REF] Make SLM functions private, add a print() (#208) (Reinder Vos de Wael) #208
• f83ccae: [GIT] Remove CI on push to development (Reinder Vos de Wael) #209
• 7c05a51: [REF] Add version, deprecation warning for 3.6 (#211) (Reinder Vos de Wael) #211
• 7cc9eac: version bump (Reinder Vos de Wael) #209

Commits

• c132b13: [ENH] Add type hinting (#195) (Reinder Vos de Wael) #195
• 370fba9: Merge branch 'master' into development (Reinder Vos de Wael) #198
• 7c5aedf: [FIX] Fix MATLAB parcellation loader (#197) (Reinder Vos de Wael) #197
• d54ea1a: version bump (Reinder Vos de Wael) #198

Commits

• a96977f: [DOC] Improvements to ReadTheDocs (#184) (Reinder Vos de Wael) #184
• a203a39: [GIT] Add Python 3.9 to unit tests (#189) (Reinder Vos de Wael) #189
• 02b378c: [REF] Enforce usage of intercept and identity matrix (#187) (Reinder Vos de Wael) #187
• c6a37ee: update multiple comparison correction (#191) (Reinder Vos de Wael) #191
• 84706be: import sorting (Reinder Vos de Wael) #190
• 7feb4a9: [ENH] Added a data loader (#192) (Reinder Vos de Wael) #192
• b705a32: [ENH] Added MATLAB data fetcher. (#193) (Reinder Vos de Wael) #193
• f5ec51b: [GIT] version bump (Reinder Vos de Wael) #194

Commits

• aacd6ad: [TST] Add mixed effects to datagen and tests for linmod (#171) (Reinder Vos de Wael) #171
• 5a44f1c: [TST, FIX] Mixed Effects models and SLM testing (#174) (Reinder Vos de Wael) #174
• 455dd87: [TST] Added windows/macos unit tests (#177) (Reinder Vos de Wael) #177
• 988e7f0: Fix unbound variable in SLM (#179) (Reinder Vos de Wael) #179
• 4484de5: [GIT] Switch to PyPi (#180) (Reinder Vos de Wael) #180
• 5bdea6f: [FIX] Fix pypi push (#181) (Reinder Vos de Wael) #181
• c4c318a: [FIX] Fix PyPi push (#182) (Reinder Vos de Wael) #182
• 6a6d905: [GIT] Make PyPi push verbose (#183) (Reinder Vos de Wael) #183

Commits

• 0731d88: [FIX] Fix requires (#169) (Reinder Vos de Wael) #169
• efe5b59: Fix requires (#170) (Reinder Vos de Wael) #170