Fourier analysis and subtomogram averaging of heterogenic cylindrical structures
BSD-3-CLAUSE License
Published by hanjinliu over 2 years ago
acryo
for subtomogram averaging. Accordingly, many simplification and improvements in structural reconstruction."nearest"
interpolation.Published by hanjinliu over 2 years ago
Seems very stable now.
magic-class
's thread_worker
instead of napari
built-in. Concomitantly, remove nbatch
arguments.align_averaged
tries many rotation angles than before.translate_random
to Molecules
.set_design
to follow Python naming rules.Molecules
.Published by hanjinliu over 2 years ago
layers.events.removing
.Published by hanjinliu over 2 years ago
GUI is largely improved.
Published by hanjinliu almost 3 years ago
fit_mao
.ft_pcc_maximum
in impy==1.24.2
.paths
→ splines
n_paths
→ n_splines
ft_params
→ local_ft_params
Published by hanjinliu almost 3 years ago
Basic algorithms seem stable and perform very well.
fit
→ OKrefine
→ OKmeasure_radius
→ OKft_params
→ OKglobal_ft_params
→ sometimes fails due to bug in straightening.GUI needs more improvement, but this might be done in the magic-class
side.
Published by hanjinliu about 3 years ago
Last update with current algorithm design.
There would be a big change after this version but basically its performance should not change.
Published by hanjinliu about 3 years ago
Basic functions are working well.
Many of them are dependent on impy
.