Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
GPL-3.0 License
SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-Seq. We evaluat...
Ultra-fast de novo assembler using long noisy reads
Structural Variant Identification Method using Genome Assemblies
Wally: Visualization of aligned sequencing reads and contigs
Assemble large genomes using short reads
A DNA design and assembly method based on multi-objective optimization.
Fast and accurate de novo assembler for long reads
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
End-guided RNA assembler
🌈Scaffold genome sequence assemblies using linked or long read sequencing data
Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
genes and genomes at your fingertips
Python library to facilitate genome assembly, annotation, and comparative genomics
Next generation sequencing reads de novo assembler.
A scalable bacterial genome assembly, annotation and analysis pipeline