Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
MIT License
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
A fast & densely stored hashmap and hashset based on robin-hood backward shift deletion
Mapping scheme test software, to be extended to sequence graphs.
tools for working with genome variation graphs
Functional programming style pattern-matching library for C++
Code Clone Detection in Clang Static Analyzer poster for LLVM Developers' Meeting 2015.
scanf for modern C++