CuTropicalGEMM

Features

CuTropicalGEMM support GEMM for various matrix element types:

and-or algebra: TropicalAndOr
max-plus algebra: Tropical{Float32/Float64}
min-plus algebra: TropicalMinPlus{Float32/Float64}
max-times algebra: TropicalMaxMul{Float32/Float64/Int32/Int64}

Please check TropicalNumbers.jl for the definitions of these types and semiring algebras.

Getting Started

Open a Julia REPL and type ] to enter the pkg> mode, and then install related packages with

pkg> add CuTropicalGEMM, BenchmarkTools, TropicalNumbers, CUDA

Loading CuTropicalGEMM module into the workspace affects the * and LinearAlgebra.mul! on CuTropical matrices immediately. The following is a minimum working example:

julia> using TropicalNumbers, CUDA, BenchmarkTools, LinearAlgebra

julia> a = Tropical.(CUDA.randn(4096, 4096));

julia> @btime CUDA.@sync $a * $a;
  295.465 ms (43 allocations: 1.75 KiB)

julia> using CuTropicalGEMM

julia> @benchmark CUDA.@sync $a * $a
BenchmarkTools.Trial: 442 samples with 1 evaluation.
 Range (min … max):  10.320 ms …  12.313 ms  ┊ GC (min … max): 0.00% … 0.00%
 Time  (median):     11.258 ms               ┊ GC (median):    0.00%
 Time  (mean ± σ):   11.327 ms ± 160.544 μs  ┊ GC (mean ± σ):  0.00% ± 0.00%

                                    █    ▆ ▁  ▃                 
  ▅▁▁▁▄▁▁▁▁▁▁▁▁▁▁▁▄▁▄▁▁▁▁▁▁▁▁▁▄▄▁▁▁▁███▆▁█▆█▅▄█▄▁▁▁▄▁▁▄▁▄▁▄▁▆▆ ▆
  10.3 ms       Histogram: log(frequency) by time      11.9 ms <

 Memory estimate: 272 bytes, allocs estimate: 8.

You can also use the function LinearAlgebra.mul!(o, a, b), which allows you to manually allocate memory for the result:

julia> using LinearAlgebra: mul!

julia> o = Tropical.(CUDA.zeros(4096, 4096));

julia> @benchmark CUDA.@sync mul!($o, $a, $a)
BenchmarkTools.Trial: 440 samples with 1 evaluation.
 Range (min … max):  10.301 ms …  12.117 ms  ┊ GC (min … max): 0.00% … 0.00%
 Time  (median):     11.373 ms               ┊ GC (median):    0.00%
 Time  (mean ± σ):   11.363 ms ± 129.334 μs  ┊ GC (mean ± σ):  0.00% ± 0.00%

                                      ▃    █                    
  ▅▁▁▄▁▁▁▁▁▁▁▁▁▁▁▁▁▄▁▁▁▄▁▁▁▁▁▁▁▁▁▁▁▁▄▁█▄▄▄▄█▇▇▅▄▇▁▁▁▁▄▄▁▁▁▁▅▁▄ ▆
  10.3 ms       Histogram: log(frequency) by time      11.9 ms <

 Memory estimate: 16 bytes, allocs estimate: 1.

Benchmarks

Here is a simple benchmark of the performance using NVIDIA A800 80GB PCIe. We compared the performance of CuTropicalGEMM.jl, GemmKernels.jl and direct CUDA.jl map reduce on Tropical GEMM with single precision.

The performance of Cublas on normal GEMM is used as a reference.

Questions and Contributions

Please open an issue if you encounter any problems, or have any feature requests.

If you want to have a check of the C-CUDA code, please check the repo TropicalGemm_Cuda.

It is also welcomed for any suggestions about the issues marked as enhancement, please let us know if you have any idea about them.

Acknowalgement

We would like to thank Tim Besard for his invaluable guidance and support during the development of the package, his expertise in GPU utilization have been immensely helpful. We would also like to thank Tyler Thomas for his assistance in understanding the usage of BinaryBuilder.jl.