pango-designation

• Added lineage C.37 from #52
• Added lineage B.1.621 from #57

Release notes

Update to B.1.617 to now designate specific sublineages representing three clusters. Full description found at #49 .

Final counts for updated designations:

B.1       40
B.1.617   1
B.1.617.1 468
B.1.617.2 112
B.1.617.3 23

B.1.617.sublineages.csv

Release notes

Update to designation of B.1.617, described fully in issue #49.

Designated 605 sequences to B.1.617 and 34 sequences previously assigned B.1.617 (never designted) now designated B.1.

• Added 4 sublineages within B.1.438 - B.1.438.1 (Canada), B.1.438.2 (Mayotte/Reunion), B.1.438.3 (USA) and B.1.438.4 (USA)
• Added B.1.438 into lineage_notes.txt

• Added lineage B.1.619
• Added lineage B.1.620

• Added lineage AT.1

• Updated B.1.526 lineages
• Added lineage B.1.526.3

• Added lineage B.1.618

• Updated withdrawn lineages
• Added B.26
• Updated B.1.177.2

• Added lineage B.1.177.88 in Italy and B.1.177.89 in Switzerland

• Added lineage N.10
• Added lineage P.1.1

• Updated A.2.5 with A.2.5.1 in Costa Rica and A.2.5.2 predominantly in Italy

• Reassigned lineage B.1.1.439 to B.1.1.29

Added B.1.429.1

Release notes

• Updating designations for sublineages of B.1.214. Now 4 sister lineages, B.1.214.1 from Congo, B.1.214.2 from Belgium with a defining 9bp insertion in the NTD of the spike gene, B.1.214.3 a french lineage and B.1.214.4 a Danish lineage.
• New designations:

B.1.214   43
B.1.214.1 20
B.1.214.2 344
B.1.214.3 58
B.1.214.4 89

Added lineage B.1.617

Release notes

• Related to commit https://github.com/cov-lineages/pango-designation/commit/f3476edb17663af350990925098f65277c470b08, reinstating lineage B.1.36.27. Hong Kong lineage associated with travel history from Nepal.

Release notes

Adding 616 B.1.389 sequences to designations.

Added B.1.616

Release notes

• Minor release fixing designations of lineages B.1.214.1 and B.1.214.2