pango-designation

• Added new lineage AY.9.2.2 from #284 with 507 new sequence designations and 265 updated from AY.9.2
• Added new lineage AY.119.2 from #288 with 2081 sequence designations
• Added new lineage AY.4.7 from #291 with 2707 new sequence designations and 1 updated from AY.4
• Added new lineage AY.4.8 from #304 with 1253 new sequence designations
• Added new lineage AY.39.1.2 from #307 with 3805 new sequence designations and 915 updated from AY.39.1

• Added new lineage AY.26.1 from #278 with 90 new sequence designations and 2 updated from AY.26
• Added new lineage AY.122.2 from #273 with 511 new sequence designations and 2272 updated from AY.122
• Updated AY.112 to correspond to a broader clade and updated the original AY.112 to AY.112.1, baed on #283

• Added new lineage AY.124.1 from #345 with 199 new sequence designations and 486 updated from AY.124
• Added new lineage B.1.637.1 from #353 with 17 new sequence designations
• Added new lineages B.1.640.1 and B.1.640.2 from #362 with 88 and 9 sequence designations, respectively
• Renamed lineage AY.97 to AY.5.5 based on #363

Release updated aliases and README

• Added new lineages BA.1 (155 sequence designations) and BA.2 (6 sequence designations) from #361

• Added new lineage AY.43.5 from #335 with 80 new sequence designations
• Added new lineage AY.119.1 from #336 with 103 new sequence designations
• Added new lineage AY.127 from #342 with 5590 new sequence designations and 9 updated from B.1.617.2
• Added new lineage AY.25.1 from #355 with 82 new sequence designations
• Added new lineage AY.4.2.3 from #356 with 1175 new sequence designations and 62 updated from AY.4.2

• Removed 95 sequence names from the designations that are potentially associated with multiple samples
• Merged AY.9.1 into AY.9.2 as they likely form a single clade. AY.9.1 is therefore withdrawn
• Updated 1156 sequence designations from B.1.1 to B.1.1.307 as they cluster within the B.1.1.307 clade in the UShER tree and have the defining mutation
• Updated 1060 sequence designations from B.1.596 to B.1.2 as they cluster within the B.1.2 clade in the UShER tree and have the defining mutation

• Added new lineage AY.4.2.2 from #249 with 2344 new sequence designations and 898 updated from AY.4.2
• Added new lineage AY.126 from #253 with 16057 new sequence designations and 3 updated from B.1.617.2
• Expanded lineage AY.34.1 and added new lineage AY.34.1.1 from #255
• Added new lineage XC from #263 with 17 new sequence designations
• Added new lineage AY.4.6 from #264 with 7487 new sequence designations
• Added new lineage AY.23.2 from #266 with 285 new sequence designations and 1 updated from AY.23
• Added new lineage AY.34.2 from #269 with 428 new sequence designations and 145 updated from AY.34

• Added new lineage AY.121 from #344 with 10909 new sequence designations and 6 updated from B.1.617.2
• Changed the label of the previous AY.121 lineage to AY.121.1 with 601 sequence designations

• Added new lineage AY.43.3 from #337 with 625 new sequence designations
• Added new lineage AY.43.4 from #317 with 464 new sequence designations and 6 updated from AY.43
• Added new lineage AY.125 from #328 with 11634 new sequence designations

• Added new lineage B.1.1.529 from #343 with 10 new sequence designations

• Added consensus constellations for each AY lineage to lineage_constellations
• Added new lineage AY.123 from #306 with 390 new sequence designations
• Updated AY.113 with 1065 new sequence designations
• Added new lineage AY.124 from #281 with 4949 new sequence designations
• Added 128 new B.1.617.2 sequence designations that cluster close to AY.113 and AY.124

• Withdrew lineage AY.75.1 as it does not have a defining mutation in the coding region. Most sequences previously designated AY.75.1 are now designated AY.75, unless they are in lineages AY.75.2 or AY.75.3
• Added new lineage AY.75.2 with 234 new sequence designations and 46 updated from AY.75
• Added new lineage AY.75.3 with 87 new sequence designations and 300 updated from AY.75
• Merged lineage B.1.177.79 into B.1.177.60 as it does not have a defining mutation within the coding region of the genome and is a subclade within B.1.177.60. Therefore B.1.177.79 is withdrawn and the 28 sequences previously designated B.1.177.79 are now designated B.1.177.60
• Updated the designations of 864 sequences from AY.39.1 to AY.39.1.1 as they cluster within the AY.39.1.1 clade
• Updated 486 sequence designations from B.1.617.2 to AY.44 as they cluster within the AY.44 clade
• Updated 40 sequence designations from B.1.617.2 to AY.46 as they cluster within the AY.46 clade
• Removed 148 AY.43 sequence designations as they are not in the UShER tree

• Updated designations for recombinant lineage XB and associated lineages. B.1.628 is withdrawn and updated to XB. Updated the designations of B.1.627, B.1.631 and B.1.634. Designated sequences described as B.1.628minor as B.1

• Added new lineage AY.20.1 from #318 with 80 new sequence designations
• Added new lineage AY.43.1 from #319 with 115 new sequence designations and 172 updated from AY.43
• Added new lineage AY.43.2 from #319 with 179 new sequence designations and 351 updated from AY.43
• Updated 148 sequence designations from B.1.617.2 to AY.58 as they cluster in the AY.58 clade
• Updated 67 sequence designations from B.1.617.2 to AY.103 as they cluster in the AY.103 clade
• Updated 57 sequence designations from B.1.617.2 to AY.119 as they cluster in the AY.119 clade
• Updated 52 sequence designations from B.1.617.2 to AY.75 as they cluster in the AY.75 clade
• Updated 33 sequence designations from B.1.617.2 to AY.117 as they cluster in the AY.117 clade
• Removed 128 sequence designations from AY.9.1, AY.9.2, AY.70 and AY.103 that are not in the UShER tree

• Added new lineage AY.122 from #320 with 70658 new sequence designations and 784 updated from B.1.617.2
• Renamed lineage AY.12 to AY.122.1 with 1754 sequence designations. This lineage descends from the newly designated AY.122. Therefore AY.12 has been withdrawn and sequences from the previously designated AY.12 lineage are in AY.122.1

• Added new lineage B.1.640 from #297 with 22 new sequence designations

• Added new lineage B.1.639 from #161 with 39 new sequence designations
• Added new lineage AY.4.2.1 from #248 with 724 new sequence designations and 565 updated from AY.4.2
• Added new lineage AY.121 from #301 with 293 new sequence designations

• Added new lineages AY.103-AY.120, AY.34.1, AY.116.1, AY.120.1-2 and AY.120.2.1

• Added new lineage AY.39.2 from #295 with 138 new sequence designations and 10 updated from AY.39