a lightweight db framework for exploring genetic variation.
MIT License
Gaussian processes framework in python
A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.
This repo contains code that is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filt...
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with...
python access to UCSC genomes database
It is an innovative repository housing a sophisticated Large Language Model (LLM) project, showca...
A toolbox for improving metagenome-assembled genomes.
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
A Python interface to gb-io, a fast GenBank parser written in Rust.
A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.
genes and genomes at your fingertips
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence ali...
Application and Python module for average nucleotide identity analyses of microbes.
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software