Python module to analyse CRISPR-based libraries
BSD-3-CLAUSE License
Open source code for AlphaFold.
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
In silico Penicillin Binding Protein (PBP) typer for Streptococcus pneumoniae assemblies
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
Gaussian processes framework in python
A repository with exploration into using transformers to predict DNA ↔ transcription factor binding
Effective selection of population size projection for construction of the site frequency spectrum...
Rapid determination of appropriate reference genomes.
To be a next-generation DL-based phenotype prediction from genome mutations.
genes and genomes at your fingertips
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
Community-curated list of software packages and data resources for single-cell, including RNA-seq...
A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association bet...
Gibbs sampling for generating protein sequences