ecell4_base

An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena

GPL-3.0 License

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ecell4_base - E-Cell4 beta2

Published by kozo2 over 9 years ago

HDF5 is optional in beta2.
(Attached binaries do NOT require HDF5 lib.)

ecell4_base - E-Cell4 beta1

Published by kozo2 almost 10 years ago

  • Add simulators for the enhanced Green's Function Reaction Dynamics and spatial Gillespie methods.
  • new build system (moved from waf to CMake and Python wheel).
  • new tutorial IPython notebooks.
  • inline javascript particle visualizer in IPython notebook.
  • Support a network-frees simulation using C++ rulebased modeling engine.