A Python FASTA file Parser and Writer.
GPL-3.0 License
Indexes genomes using SNVs, MLST, or kmers for rapid querying, clustering, and visualization.
Namespace encoding hierarchical relationships between proteins, protein families, and protein com...
Freeing data processing from scripting madness by providing a set of platform-agnostic customizab...
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
A Python library for parsing frame ranges.
Rapid determination of appropriate reference genomes.
A collection of useful bioinformatics scripts.
Consensus sequences for each Pango lineage
genes and genomes at your fingertips
HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq
Visualization for Sequential Neural Networks with Attention
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
Package for fetching metadata and downloading data from SRA/ENA/GEO
Miscellaneous tools for genomics