Copy number caller for long read data including SNV utilization
MIT License
Rapid determination of appropriate reference genomes.
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
Effective selection of population size projection for construction of the site frequency spectrum...
A fast Python and command-line utility for extracting simple statistics against genome positions ...
Improvement of metagenome-assembled genomes
Quickly get the taxonomy of a genome
MicrobeCensus estimates the average genome size of microbial communities from metagenomic data
Structural variation caller using third generation sequencing
Tools for loading NCBI Biosample into an XML database and then transforming that into a SQL database
Metagenomic species profiling with enhanced coverage of the human gut microbiome
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecu...
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Targeted Detection and Reconstruction of Plasmids
Unified Human Gut Virome Catalog