Frequently used commands in bioinformatics
MIT License
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence ali...
Effective selection of population size projection for construction of the site frequency spectrum...
Namespace encoding hierarchical relationships between proteins, protein families, and protein com...
Tools for loading NCBI Biosample into an XML database and then transforming that into a SQL database
Some code to work with CCAgT dataset. Annotations format conversion, mask generation, plotting sa...
Research codes for image interestingness
Super sensitive mutation validator, uses sam/bam and vcf
Improvement of metagenome-assembled genomes
📊📈🔬 SpectraFit is a command-line and Jupyter-notebook tool for quick data-fitting based on the re...
Miscellaneous tools for genomics
Instant data plotting from the terminal into the terminal
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
Unified Human Gut Virome Catalog
Powerful statistics for VCF files
A tool for the recovery of unassembled telomeres from soft-clipped read alignments.