Galaxy wrappers for NCBI BLAST+ and related BLAST tools.
Rapid determination of appropriate reference genomes.
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
A Python interface to gb-io, a fast GenBank parser written in Rust.
Indexes genomes using SNVs, MLST, or kmers for rapid querying, clustering, and visualization.
A tool to help you gather information and manage your Ansible roles.
Official git repository for Biopython (originally converted from CVS)
Source code, data and documentation to demonstrate automation in NGS data analysis
genes and genomes at your fingertips
Biomedical Entity Linking Benchmark
A toolbox for comparative genomics.
Incubator for useful bioinformatics code, primarily in Python and R
Application and Python module for average nucleotide identity analyses of microbes.
Aggregate results from bioinformatics analyses across many samples into a single report.
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
A toolbox for improving metagenome-assembled genomes.