Genotype network software, collaboration with Kyle Yuan.
MIT License
Package for local graph clustering
Gibbs sampling for generating protein sequences
EXPERIMENTAL rendering of phenopackets in linkml
A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association bet...
Replication attempt for the Protein Folding Model described in https://www.biorxiv.org/content/10...
Combinatorial Complex Score-based Diffusion model using stochastic differential equations
Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing
Unified generation and analysis of networks in Python, with neuroscientific additions
Spiky networks
To be a next-generation DL-based phenotype prediction from genome mutations.
genes and genomes at your fingertips
Network Analysis in Python
Implementation of the Cypher language for searching NetworkX graphs
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details...