NOTE: see new version at https://github.com/daler/gffutils.
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Miscellaneous tools for genomics
Namespace encoding hierarchical relationships between proteins, protein families, and protein com...
This repository hosts a minimal version of a Python API for BPNet.
Effective selection of population size projection for construction of the site frequency spectrum...
Quickly get the taxonomy of a genome
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
Rapid determination of appropriate reference genomes.
Targeted Detection and Reconstruction of Plasmids
PyGraphistry is a Python library to quickly load, shape, embed, and explore big graphs with the G...
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Tools used to analyze data from nanopore-based experiments.
Converts profiling output to a dot graph.
genes and genomes at your fingertips
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing