ktplotspy

What's Changed

• Add interacting pairs option by @zktuong in https://github.com/zktuong/ktplotspy/pull/72
• Fix two some small problems by @nictru in https://github.com/zktuong/ktplotspy/pull/78

Dependabot updates

• pip prod(deps): update sphinx requirement from <7 to <8 by @dependabot in https://github.com/zktuong/ktplotspy/pull/75
• pip prod(deps): update nbsphinx requirement from <=0.9.4 to <=0.9.5 by @dependabot in https://github.com/zktuong/ktplotspy/pull/76

New Contributors

• @nictru made their first contribution in https://github.com/zktuong/ktplotspy/pull/78

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.2.4...v0.2.5

What's Changed

• Update plot_cpdb_heatmap.py by @zktuong in https://github.com/zktuong/ktplotspy/pull/67
• Issue fix min p value by @ali-harasty in https://github.com/zktuong/ktplotspy/pull/70

Dependabot updates

• pip prod(deps): update nbsphinx requirement from <=0.9.3 to <=0.9.4 by @dependabot in https://github.com/zktuong/ktplotspy/pull/68

New Contributors

• @ali-harasty made their first contribution in https://github.com/zktuong/ktplotspy/pull/70

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.2.3...v0.2.4

What's Changed

Fix some bugs introduced in v0.2.2 while trying to fix the uneven pvalues/relevant interaction files with the new cellphonedb v5 outputs

Added a new option to heatmap to allow slicing of only relevant cell types.

• Pin versions by @zktuong in https://github.com/zktuong/ktplotspy/pull/54
• check if incorrect dimensions and pad numbers if missing by @zktuong in https://github.com/zktuong/ktplotspy/pull/57
• Add celltypes option to heatmap by @zktuong in https://github.com/zktuong/ktplotspy/pull/58
• Revert "check if incorrect dimensions and pad numbers if missing (#57)" by @zktuong in https://github.com/zktuong/ktplotspy/pull/61
• attempt to fix missing interactions 1 by @zktuong in https://github.com/zktuong/ktplotspy/pull/62
• fix uneven columns and rows by @zktuong in https://github.com/zktuong/ktplotspy/pull/63

Dependabot updates

• pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.3 to <=2.2.4 by @dependabot in https://github.com/zktuong/ktplotspy/pull/49
• pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.4 to <=2.2.5 by @dependabot in https://github.com/zktuong/ktplotspy/pull/50
• Bump tj-actions/changed-files from 35 to 41 in /.github/workflows by @dependabot in https://github.com/zktuong/ktplotspy/pull/52
• pip prod(deps): update pandas requirement from ^1.5.0 to >=1.5,<3.0 by @dependabot in https://github.com/zktuong/ktplotspy/pull/55
• pip prod(deps): update seaborn requirement from ^0.12.0 to >=0.12,<0.14 by @dependabot in https://github.com/zktuong/ktplotspy/pull/56

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.2.1...v0.2.3

What's Changed

• pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.3 to <=2.2.4 by @dependabot in https://github.com/zktuong/ktplotspy/pull/49
• pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.4 to <=2.2.5 by @dependabot in https://github.com/zktuong/ktplotspy/pull/50
• Bump tj-actions/changed-files from 35 to 41 in /.github/workflows by @dependabot in https://github.com/zktuong/ktplotspy/pull/52
• Pin versions by @zktuong in https://github.com/zktuong/ktplotspy/pull/54
• pip prod(deps): update pandas requirement from ^1.5.0 to >=1.5,<3.0 by @dependabot in https://github.com/zktuong/ktplotspy/pull/55
• pip prod(deps): update seaborn requirement from ^0.12.0 to >=0.12,<0.14 by @dependabot in https://github.com/zktuong/ktplotspy/pull/56
• check if incorrect dimensions and pad numbers if missing by @zktuong in https://github.com/zktuong/ktplotspy/pull/57
• Add celltypes option to heatmap by @zktuong in https://github.com/zktuong/ktplotspy/pull/58

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.2.1...v0.2.2

Mostly minor bug fixing to deal with indexing proglem

What's Changed

• pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.2 to <=2.2.3 by @dependabot in https://github.com/zktuong/ktplotspy/pull/44
• Update README.rst by @zktuong in https://github.com/zktuong/ktplotspy/pull/45
• fix duplicate rownames introduced in cellphonedb v5 by @zktuong in https://github.com/zktuong/ktplotspy/pull/48
• pip prod(deps): update sphinx-rtd-theme requirement from <=1.3.0 to <=2.0.0 by @dependabot in https://github.com/zktuong/ktplotspy/pull/47

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.2.0...v0.2.1

What's Changed

Miainly compatibility with upcoming cellphonedb version

Detailed notes:

• Create dependabot.yml by @zktuong in https://github.com/zktuong/ktplotspy/pull/26
• pip prod(deps): update anndata requirement from ^0.7.6 to >=0.7.6,<0.10.0 by @dependabot in https://github.com/zktuong/ktplotspy/pull/27
• update ci by @zktuong in https://github.com/zktuong/ktplotspy/pull/28
• Bugfix for significant interactions by @zktuong in https://github.com/zktuong/ktplotspy/pull/30
• check to see if this fixes dependabot probs by @zktuong in https://github.com/zktuong/ktplotspy/pull/35
• pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.0 to <=2.2.2 by @dependabot in https://github.com/zktuong/ktplotspy/pull/32
• pip prod(deps): update sphinx-rtd-theme requirement from <=1.2.0 to <=1.2.2 by @dependabot in https://github.com/zktuong/ktplotspy/pull/33
• pip prod(deps): update nbsphinx requirement from <=0.9.1 to <=0.9.2 by @dependabot in https://github.com/zktuong/ktplotspy/pull/34
• Update tests.yaml by @zktuong in https://github.com/zktuong/ktplotspy/pull/36
• pip prod(deps): update sphinx-rtd-theme requirement from <=1.2.2 to <=1.3.0 by @dependabot in https://github.com/zktuong/ktplotspy/pull/41
• pip prod(deps): update nbsphinx requirement from <=0.9.2 to <=0.9.3 by @dependabot in https://github.com/zktuong/ktplotspy/pull/42
• Prep for v5 by @zktuong in https://github.com/zktuong/ktplotspy/pull/38

New Contributors

• @dependabot made their first contribution in https://github.com/zktuong/ktplotspy/pull/27

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.10...v0.2.0

What's Changed

• compliance with pandas2.0 by @zktuong in https://github.com/zktuong/ktplotspy/pull/24
• fix the output table by @zktuong in https://github.com/zktuong/ktplotspy/pull/25

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.9...v0.1.10

What's Changed

• Fix heatmap symmetry by @zktuong in https://github.com/zktuong/ktplotspy/pull/23

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.8...v0.1.9

What's Changed

• Fix bug Heatmap by @Tu-feng in https://github.com/zktuong/ktplotspy/pull/18

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.7...v0.1.8

What's Changed

• Update email by @zktuong in https://github.com/zktuong/ktplotspy/pull/15
• Fix bug Heatmap (Tu-feng#16) by @Tu-feng in https://github.com/zktuong/ktplotspy/pull/17

New Contributors

• @Tu-feng made their first contribution in https://github.com/zktuong/ktplotspy/pull/17

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.6...v0.1.7

What's Changed

• Fix heatmap by @zktuong in https://github.com/zktuong/ktplotspy/pull/14

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.5...v0.1.6

What's Changed

• Fix regex bug by @zktuong in https://github.com/zktuong/ktplotspy/pull/13

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.4...v0.1.5

What's Changed

• Add plot_cpdb_chord by @zktuong in https://github.com/zktuong/ktplotspy/pull/12

Added the Circos-style plotting function!

Also, minor bug fix - some non-significant hits were still being drawn with red lines - had to enforce a step to make the fill larger than the colour.

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.3...v0.1.4

What's Changed

• try caching pip by @zktuong in https://github.com/zktuong/ktplotspy/pull/8
• add new options by @zktuong in https://github.com/zktuong/ktplotspy/pull/10

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.2...v0.1.3

Update pyproject.toml so that pypi can have more information.

Bump version properly.

Full Changelog: https://github.com/zktuong/ktplotspy/compare/v0.1.1...v0.1.2

What's Changed

• add pypi badge by @zktuong in https://github.com/zktuong/ktplotspy/pull/5
• Fix non-default style not showing non-significant results. by @zktuong in https://github.com/zktuong/ktplotspy/pull/6

Full Changelog: https://github.com/zktuong/ktplotspy/compare/0.1.0...v0.1.1

What's Changed

• add docs by @zktuong in https://github.com/zktuong/ktplotspy/pull/1
• fix-publish-v2 by @zktuong in https://github.com/zktuong/ktplotspy/pull/3
• Update publish_pypi.yaml by @zktuong in https://github.com/zktuong/ktplotspy/pull/4

New Contributors

• @zktuong made their first contribution in https://github.com/zktuong/ktplotspy/pull/1

Full Changelog: https://github.com/zktuong/ktplotspy/commits/0.1.0