leidenalg

diplib

Quantitative Image Analysis in C++, MATLAB and Python

LocalGraphClustering

Package for local graph clustering

rFBP

Replicated Focusing Belief Propagation algorithm

python-kmedoids

Fast K-Medoids clustering in Python with FasterPAM

python-louvain

Louvain Community Detection

twitter-graph

Fetch and visualize the graph of your Twitter friends and followers.

ckiptagger

CKIP Neural Chinese Word Segmentation, POS Tagging, and NER

automlsa2

Automated Multi-Locus Sequence Analysis phylogenetic tree construction software

mlxtend

A library of extension and helper modules for Python's data analysis and machine learning libraries.

hlc

Hierarchical link clustering of Ahn et al (2010) - alternative Python implementation

CCSD

Combinatorial Complex Score-based Diffusion model using stochastic differential equations

alphageometry

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

alphafold

Open source code for AlphaFold.

GDL

Code for Online Graph Dictionary Learning