LRBinner is a long-read binning tool published in WABI 2021 proceedings and AMB.
GPL-2.0 License
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Package for fetching metadata and downloading data from SRA/ENA/GEO
Reference-free Binning of Metagenomics Long Reads using Coverage and Composition
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details...
Single-document unsupervised keyword extraction
Replicated Focusing Belief Propagation algorithm
Open source code for AlphaFold.
Implementation of Alphafold 3 in Pytorch
Application and Python module for average nucleotide identity analyses of microbes.
GLM (General Language Model)
A repository with exploration into using transformers to predict DNA ↔ transcription factor binding
Open source Python library for building bioimage analysis pipelines
Fast Best-Subset Selection Library
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biome...
Biomedical Entity Linking Benchmark
Command-line bibliography manager