Metabolomics Spectrum Resolver/Displayer
MIT License
Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023
Tools for loading NCBI Biosample into an XML database and then transforming that into a SQL database
Unified Human Gut Virome Catalog
User interface to reanalyze and explore all public data in Metabolomics Public Data
RLHF implementation details of OAI's 2019 codebase
Code for design of diagnostic PCR primers, and metabarcoding markers.
PySB model of interactions of tBid, Bax, and liposomes.
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
Frequently used commands in bioinformatics
The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to...
Multi-modal Molecule Structure-text Model for Text-based Editing and Retrieval, Nat Mach Intell 2...
📊📈🔬 SpectraFit is a command-line and Jupyter-notebook tool for quick data-fitting based on the re...
A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
A python-solver for Tanabe-Sugano and energy-correlation diagrams