MicrobeCensus estimates the average genome size of microbial communities from metagenomic data
GPL-3.0 License
A toolbox for comparative genomics.
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
A simple tool to determine the genome size of an organism
Unified Human Gut Virome Catalog
Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecu...
Rapid determination of appropriate reference genomes.
Miscellaneous tools for genomics
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
Reference-free Binning of Metagenomics Long Reads using Coverage and Composition
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Improvement of metagenome-assembled genomes
Quickly get the taxonomy of a genome
A toolbox for improving metagenome-assembled genomes.
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Metagenomic species profiling with enhanced coverage of the human gut microbiome