🐞 Convert NCBI taxonomy dump into lineages
MIT License
A Python interface to gb-io, a fast GenBank parser written in Rust.
Biomedical Entity Linking Benchmark
Source code, data and documentation to demonstrate automation in NGS data analysis
16S rRNA database
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
Quickly get the taxonomy of a genome
Unified Human Gut Virome Catalog
Application and Python module for average nucleotide identity analyses of microbes.
Rapid determination of appropriate reference genomes.
genes and genomes at your fingertips
Open source code for AlphaFold.
A toolbox for improving metagenome-assembled genomes.
A repository with exploration into using transformers to predict DNA ↔ transcription factor binding
A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set ...
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing