ncfp

• Update copyright notices
• Convert parsers to use pathlib
• Add requirements file for development tools
• Convert tests to use pytest, not nose
• Revise logging usage
• Change continuous integration from TravisCI to CircleCI
• Guess sequence origin rather than asking user to provide at CLI (allows mixed origin files)
• Update CLI parser and docs to reflect new sequence origin guessing

This release does not change the API or add new features. Code is cleaned internally in response to issues raised by codacy.

This is the initial release for the ncfp program and ncbi_cds_from_protein module.

The ncfp program works as advertised, and there is initial documentation describing its use. There is also a test suite that covers the basic operation of the tool for regression.

However, documentation is not complete, the docstrings are not in REST, and the test suite is not at complete coverage and does not cover all desired unit tests.