Improving the quality of deep sequencing data
MIT License
Overlap assembler of paired-end DNA sequences generated by Illumina
Improvement of metagenome-assembled genomes
Metagenomic species profiling with enhanced coverage of the human gut microbiome
Source code, data and documentation to demonstrate automation in NGS data analysis
Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecu...
Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
A toolbox for comparative genomics.
A toolbox for improving metagenome-assembled genomes.
Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing
Code for design of diagnostic PCR primers, and metabarcoding markers.
HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence ali...
A Python interface to gb-io, a fast GenBank parser written in Rust.
Unified Human Gut Virome Catalog