Add make_bdv_from_dask_array for dask array support by @boazmohar
Published by constantinpape about 3 years ago
Better support for on the fly processing:
- adds
initialize_bdvfunction to create an empty bdv dataset
Published by constantinpape over 3 years ago
Published by constantinpape almost 4 years ago
- Add bdv dataset to write to all scale levels of a file in bdv format from python; implemented by @jhennies
- Fix issues in downscaling methods
- Work on support for zarr (not working yet due to https://github.com/zarr-developers/zarr-python/issues/693)
Published by constantinpape over 4 years ago
Published by constantinpape over 4 years ago
Utility functions to read resolution, file type and scale factors from bdv files.
Published by constantinpape almost 5 years ago
- Support conversion to n5 bdv format
- Implement multi-threaded copying and downscaling
Published by constantinpape about 5 years ago
Convert interger dtypes to be compatible with BDV.
Dtype conversion can be disabled by passing convert_dtype=False to make_bdv / convert_to_bdv.
Published by constantinpape about 5 years ago
Fix CLI:
- move
pybdv_converterfrom root topydv/scripts - install it in
setup.py
Fix issue in determination of shapes for downscaling.
Published by constantinpape about 5 years ago
Infer correct next set-up id when passed default value.
Published by constantinpape about 5 years ago
- Improve selection of downsampling methods and extend methods to
min,max,mean,interpolate,nearest. - Support multiple view set-ups.
Published by constantinpape over 5 years ago
Base functionality is working
