A toolbox for improving metagenome-assembled genomes.
GPL-3.0 License
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Quickly get the taxonomy of a genome
genes and genomes at your fingertips
Reference-free Binning of Metagenomics Long Reads using Coverage and Composition
Improvement of metagenome-assembled genomes
16S rRNA database
Application and Python module for average nucleotide identity analyses of microbes.
A toolbox for comparative genomics.
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
Code for design of diagnostic PCR primers, and metabarcoding markers.
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Unified Human Gut Virome Catalog
Open source code for AlphaFold.
Rapid determination of appropriate reference genomes.
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing