A tool for the recovery of unassembled telomeres from soft-clipped read alignments.
OTHER License
Code for design of diagnostic PCR primers, and metabarcoding markers.
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence ali...
Community-curated list of software packages and data resources for single-cell, including RNA-seq...
Improvement of metagenome-assembled genomes
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with...
Unified Human Gut Virome Catalog
genes and genomes at your fingertips
Application and Python module for average nucleotide identity analyses of microbes.
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
A toolbox for improving metagenome-assembled genomes.
A fast Python and command-line utility for extracting simple statistics against genome positions ...
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
A repository with exploration into using transformers to predict DNA ↔ transcription factor binding
Targeted Detection and Reconstruction of Plasmids