xyzpy

Breaking changes

• Remove all the data processing functionality which can now pretty much all be found in xarray. This also
  removes the numba, scipy and cytoolz dependencies completely.

Enhancements

• Generalize (and deprecate) :meth:xyzpy.Crop.qsub_grow to :meth:xyzpy.Crop.grow_cluster (#10)
• Add SLURM support to :meth:xyzpy.Crop.grow_cluster (#10)
• Add PBS support to :meth:xyzpy.Crop.grow_cluster
• Fix PBS crop submission for job arrays of size 1
• Add :func:xyzpy.save_merge_ds for manually aggregating datasets to disk
• Add allow_incomplete=True option to :meth:xyzpy.Crop.reap for gathering data even if the crop is not fully grown (#7)
• Make new :class:~xyzpy.Crop instances by default automatically load information from disk if they have been already prepared/sown (#7)
• Automatically load Crops in the current (or specified) directory with :func:xyzpy.load_crops.
• Add 'joblib' and 'zarr' as possible engines for saving and loading datasets
• Add utility :func:xyzpy.getsizeof to quite accurately get a python objects size
• Keep a running track of covariance using :class:~xyzpy.utils.RunningCovariance.

Breaking changes

• (#5) combo_runner key argument pool renamed to executor

Enhancements

• (#5) Support multiprocessing.pool in combo_runner
• Document timing and estimation utilities
• Use loky as the default parallel executor
• plotting: add xjitter and yjitter

Bug fixes:

• make sure Crop._batch_remainder synced with disk.
• update pytest marking parametrizations to xfail for recent pytest
• compatibility updates for dask and numba
• fix farming example which wasn't appearing