uniprot.rs

Fixed

• Large test files being included in distributed crates.io source package.

Added

• parse_entry functions to parse a single UniProt, UniParc or UniRef entry.

Fixed

• Parsing of creation dates with a defined timezone (e.g. 2021-01-11Z).

Added

• uniprot::uniref module to parse UniRef XML files.
• uniprot::uniparc module to parse UniParc XML files.

Changed

• Moved types to parse UniProt XML files to the uniprot::uniprot module.

Fixed

• Parsers now check the name of the root element before starting to parse the entries.

Changed

• lazy_static and num_cpus are only required ot build with threading feature.
• Slightly improved performance of ThreadedParser.

Added

• ThreadedParser::with_threads constructor to control the number of threads to spawn when parsing

Changed

• ThreadedParser does not required the reader to be Send + 'static anymore.

Added

• Implemented multithreading parser using crossbeam-channel, which can be removed by disabling the threading feature.
• Improved documentation of ::error and ::parser modules.

Fixed

• Missing implementation of submittedName deserialization within protein entries that crashed on TrEMBL.

Changed

• Removed remaining explicit panic! calls.

Added

• FromStr implementation for some enum types that are read from XML attributes.

Initial release.