RNAseq

RNA-Seq processing pipeline

GPL-3.0 License

Stars

Ecosystems: Shell

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GATK pipeline compatible with Cirrus

A VirusSeq pipeline for processing multiple RNAseq samples: a command line approach.

RNA-seq pipeline automation scripts

Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)

nRex: Germline and somatic single-nucleotide, short indel and structural variant calling

Run Picard on BAM files and collate 90 metrics into one file.