Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing
BSD-3-CLAUSE License
A Python package for pharmacogenomics (PGx) research
This repository hosts a minimal version of a Python API for BPNet.
Improvement of metagenome-assembled genomes
Code for design of diagnostic PCR primers, and metabarcoding markers.
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
Community-curated list of software packages and data resources for single-cell, including RNA-seq...
Copy number caller for long read data including SNV utilization
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Metagenomic species profiling with enhanced coverage of the human gut microbiome
Unified Human Gut Virome Catalog
MicrobeCensus estimates the average genome size of microbial communities from metagenomic data
Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing
TristouNet: Triplet Loss for Speaker Turn Embedding
A method for analyzing scATAC-seq experiments.