Clairvoyante

Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

BSD-3-CLAUSE License

Stars
171
Committers
8
View Code on GitHub View on X
Ecosystems: Python
Clairvoyante - v1.02 Latest Release

Published by aquaskyline over 5 years ago

Clairvoyante - The version used for the resarch paper

Published by aquaskyline about 6 years ago

Badges
Extracted from project README
License
Related Projects
bpnet-lite

This repository hosts a minimal version of a Python API for BPNet.

25 Sep 2020 26
IGGsearch

Metagenomic species profiling with enhanced coverage of the human gut microbiome

18 Jul 2018 24
MicrobeCensus

MicrobeCensus estimates the average genome size of microbial communities from metagenomic data

27 Feb 2014 42
TristouNet

TristouNet: Triplet Loss for Speaker Turn Embedding

21 Sep 2016 124
dragonnfruit

A method for analyzing scATAC-seq experiments.

17 Oct 2022 23
ProteinDT

05 Feb 2023 41
awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq...

29 Jun 2016 2,943
redundans

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

07 Apr 2015 128
Spectre

Copy number caller for long read data including SNV utilization

06 Jun 2023 53
enformer-pytorch

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

23 Oct 2021 420
UHGV

Unified Human Gut Virome Catalog

03 Dec 2022 27
find_differential_primers

Code for design of diagnostic PCR primers, and metabarcoding markers.

30 Jan 2012 58
MAGpurify

Improvement of metagenome-assembled genomes

24 Apr 2018 48
pypgx

A Python package for pharmacogenomics (PGx) research

20 Jun 2020 64
demuxalot

Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing

22 Jan 2020 23