Python NGS Repository
MIT License
negspy is a package for retrieving chromosome sizes in python.
Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
A simple tool to determine the genome size of an organism
This repo contains code that is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filt...
Miscellaneous tools for genomics
Normalization methods for RNA-Seq expression data in Python.
Python bindings to UCSC BigWig and BigBed library
Package for fetching metadata and downloading data from SRA/ENA/GEO
Tools for working with PubMed data.
Bioinformatics program inStrain
Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")
Multidimensional data analysis
Algorithm Problem Solutions
A Sanger chromatograph viewer.