Source code, data and documentation to demonstrate automation in NGS data analysis
31 bioinformatics utilities in a trenchcoat
A toolbox for comparative genomics.
A Python interface to gb-io, a fast GenBank parser written in Rust.
Incubator for useful bioinformatics code, primarily in Python and R
A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.
Code for design of diagnostic PCR primers, and metabarcoding markers.
a lightweight db framework for exploring genetic variation.
Query sequence database by HMMs arranged in predefined synteny structure
Rapid determination of appropriate reference genomes.
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence ali...
Improving the quality of deep sequencing data
Unified Human Gut Virome Catalog
Improvement of metagenome-assembled genomes
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
A toolbox for improving metagenome-assembled genomes.