optimally-oriented-flux

MIT License

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Optimally oriented flux

This is a Python reimplementation of the MATLAB code by Max W.K. Law: Optimally Oriented Flux (OOF) for 3D Curvilinear Structure Detection.

I haven't verified that it works exactly the same.

Installation

pip install git+https://github.com/fepegar/optimally-oriented-flux

Usage

oof input_file.nii.gz output_file.nii.gz