a broadly applicable tool for automated gene identification and retrieval
MIT License
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Published by JLSteenwyk 12 months ago
Published by JLSteenwyk almost 3 years ago
Published by JLSteenwyk about 3 years ago
Aggregate results from bioinformatics analyses across many samples into a single report.
genes and genomes at your fingertips
Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)
Automated Multi-Locus Sequence Analysis phylogenetic tree construction software
Open source code for AlphaFold.
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq
Streamlining phylogenomic data gathering, processing and visualization
a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies
A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association bet...
a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees
a versatile toolkit for processing and analyzing diverse types of sequence data
Rapid determination of appropriate reference genomes.
a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference