A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers
GPL-3.0 License
16S rRNA database
python port of taxize (taxonomy toolbelt) for R
Rapid determination of appropriate reference genomes.
Improvement of metagenome-assembled genomes
A toolbox for improving metagenome-assembled genomes.
🐞 Convert NCBI taxonomy dump into lineages
Resolve und retrieve database cross reference data used in bioinformatics databases
Gene tree correction using species tree and NJ
Query sequence database by HMMs arranged in predefined synteny structure
A toolbox for comparative genomics.
Unified Human Gut Virome Catalog
31 bioinformatics utilities in a trenchcoat
Quickly get the taxonomy of a genome
A simple tool to determine the genome size of an organism
Metagenomic species profiling with enhanced coverage of the human gut microbiome