Tools to download, parse and filter GenBank files
APACHE-2.0 License
Modeling phycospheric metabolic interactions in python
Query sequence database by HMMs arranged in predefined synteny structure
Indexes genomes using SNVs, MLST, or kmers for rapid querying, clustering, and visualization.
genes and genomes at your fingertips
Official git repository for Biopython (originally converted from CVS)
A Python interface to gb-io, a fast GenBank parser written in Rust.
Add biological annotations to variants in a given VCF file.
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
A Python parser for the BRENDA database
Source code, data and documentation to demonstrate automation in NGS data analysis
Physicochemical properties, indices and descriptors for amino-acid sequences.
Tool for ribo-seq analysis. Most of the functionality moved to ribotricer (https://github.com/smi...
Rapid determination of appropriate reference genomes.
Evolutionary trees of programming languages, derived from analagous code snippets.