Get microbiome data from various repos
MIT License
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
Resources for a talk about streaming data analysis in Python
Programmatic interface to the Neotoma paleoecological database for python development
Personal data discovery and analysis
HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq
the sponge microbiome database
website interfacing the dbbact rest api server microbiome knowledge base
16S rRNA database
Scripts for miscelleneous bioinformatics tasks
Analyse genetic variation.
Bioinformatics program inStrain
Package for fetching metadata and downloading data from SRA/ENA/GEO
GUI for Calour functions
A python interface to FoodDataCentral